WormBase Tree Display for CDS: PPA44132
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PPA44132 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S41-15.33 | ||
DB_remark | PPA-CAT-2 protein; contains similarity to Pfam domain PF00351 (Biopterin-dependent aromatic amino acid hydroxylase); contains similarity to Interpro domains IPR019773 (Tyrosine 3-monooxygenase-like), IPR001273 (Aromatic amino acid hydroxylase), IPR036951 (Aromatic amino acid hydroxylase superfamily), IPR036329 (Aromatic amino acid monoxygenase, C-terminal domain superfamily), IPR019774 (Aromatic amino acid hydroxylase, C-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00282501 | ||||
Corresponding_transcript | PPA44132.1 | |||||
Corresponding_protein | PP70128 | |||||
Corresponding_oligo_set | GPL14372_Probes_85992 | |||||
GPL14372_Probes_85993 | ||||||
GPL14372_Probes_85995 | ||||||
Microarray_results | GPL14372_Probes_85992 | |||||
GPL14372_Probes_85993 | ||||||
GPL14372_Probes_85995 | ||||||
RNASeq_FPKM | WBls:0000032 | 4.54757 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.68542 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |