WormBase Tree Display for CDS: PPA44220
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PPA44220 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 26 | |||
876 | 971 | |||||
1054 | 1115 | |||||
1160 | 1213 | |||||
1369 | 1446 | |||||
1545 | 1665 | |||||
2918 | 2996 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S41-51.40 | ||
DB_remark | contains similarity to Interpro domain IPR016187 (C-type lectin fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00282589 | ||||
Corresponding_transcript | PPA44220.1 | |||||
Corresponding_protein | PP65585 | |||||
Corresponding_oligo_set | GPL14372_Probes_6788 | |||||
GPL14372_Probes_6789 | ||||||
GPL14372_Probes_6790 | ||||||
GPL14372_Probes_6791 | ||||||
Microarray_results | GPL14372_Probes_6788 | |||||
GPL14372_Probes_6789 | ||||||
GPL14372_Probes_6790 | ||||||
GPL14372_Probes_6791 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |