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WormBase Tree Display for CDS: PPA44409b

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Name Class

PPA44409bEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (19)
DB_infoDB_remarkcontains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusPredicted
IsoformCurator_confirmedWBPerson4055
VisibleGeneWBGene00282778
Corresponding_transcriptPPA44409b.1
Corresponding_proteinPP75025
Corresponding_oligo_setGPL14372_Probes_55201
GPL14372_Probes_55202
Microarray_resultsGPL14372_Probes_55201
GPL14372_Probes_55202
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed04 Jul 2019 11:27:48WBPerson4055
Remark[190704 mh6] This structure has been created based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated