WormBase Tree Display for CDS: PPA44438
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PPA44438 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 37 | |||
586 | 699 | |||||
748 | 842 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S57-46.3 | ||
DB_remark | contains similarity to Pfam domain PF00240 (Ubiquitin family); contains similarity to Interpro domains IPR029071 (Ubiquitin-like domain superfamily), IPR000626 (Ubiquitin-like domain), IPR019956 (Ubiquitin domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00282807 | ||||
Corresponding_transcript | PPA44438.1 | |||||
Corresponding_protein | PP56740 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |