WormBase Tree Display for CDS: PPA44587
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PPA44587 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S66-25.5 | ||
DB_remark | contains similarity to Pfam domain PF13920 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00282956 | ||||
Corresponding_transcript | PPA44587.1 | |||||
Corresponding_protein | PP69901 | |||||
Matching_cDNA | BI500792 | Inferred_automatically | transcript_builder.pl | |||
CN656949 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000032 | 3.4525 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 47.5677 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |