WormBase Tree Display for CDS: PPA45031
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PPA45031 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | |||
1246 | 1342 | |||||
1382 | 1468 | |||||
1534 | 1620 | |||||
1670 | 1765 | |||||
1835 | 1943 | |||||
2019 | 2120 | |||||
2315 | 2321 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S250-7.24 | ||
DB_remark | contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00283400 | ||||
Corresponding_transcript | PPA45031.1 | |||||
Corresponding_protein | PP70195 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |