WormBase Tree Display for CDS: PPA45595
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PPA45595 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 147 | |||
191 | 316 | |||||
371 | 414 | |||||
459 | 531 | |||||
573 | 695 | |||||
753 | 842 | |||||
884 | 973 | |||||
1011 | 1154 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S2838-47.66 | ||
DB_remark | contains similarity to Pfam domain PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domain IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00283964 | ||||
Corresponding_transcript | PPA45595.1 | |||||
Corresponding_protein | PP61313 | |||||
Corresponding_oligo_set | GPL14372_Probes_19917 | |||||
GPL14372_Probes_19919 | ||||||
Microarray_results | GPL14372_Probes_19917 | |||||
GPL14372_Probes_19919 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |