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WormBase Tree Display for CDS: PPA45812

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Name Class

PPA45812SMapS_parentSequencePPA_ChrIV
StructureSource_exons1125
174293
336414
512610
660800
850939
DB_infoDatabasepristionchus.orgcdsgene-UMS-S2840-103.23
DB_remarkcontains similarity to Pfam domains PF00408 (Phosphoglucomutase/phosphomannomutase, C-terminal domain), PF02880 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III); contains similarity to Interpro domains IPR005843 (Alpha-D-phosphohexomutase, C-terminal), IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III), IPR036900 (Alpha-D-phosphohexomutase, C-terminal domain superfamily), IPR005846 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain III)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00284181
Corresponding_transcriptPPA45812.1
Corresponding_proteinPP72724
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.22628From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated