WormBase Tree Display for CDS: PPA46135
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PPA46135 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrIV | |||
Structure | Source_exons | 1 | 16 | |||
349 | 438 | |||||
594 | 718 | |||||
874 | 1041 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00177 (Ribosomal protein S7p/S5e); contains similarity to Interpro domains IPR023798 (Small ribosomal subunit protein uS7 domain), IPR000235 (Small ribosomal subunit protein uS7), IPR036823 (Small ribosomal subunit protein uS7 domain superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00284504 | ||||
Corresponding_transcript | PPA46135.1 | |||||
Corresponding_protein | PP75967 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 19 Dec 2019 14:39:45 | WBPerson4055 | ||||
Remark | [191219 mh6] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |