WormBase Tree Display for CDS: PPA46486
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PPA46486 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00248 (Aldo/keto reductase family); contains similarity to Interpro domains IPR036812 (NADP-dependent oxidoreductase domain superfamily), IPR020471 (Aldo-keto reductase), IPR023210 (NADP-dependent oxidoreductase domain) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00304265 | ||||
Corresponding_transcript | PPA46486.1 | |||||
Corresponding_protein | PP11558 | |||||
Corresponding_oligo_set | GPL14372_Probes_72774 | |||||
GPL14372_Probes_72775 | ||||||
GPL14372_Probes_72776 | ||||||
Matching_cDNA | FG096472 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_72774 | |||||
GPL14372_Probes_72775 | ||||||
GPL14372_Probes_72776 | ||||||
RNASeq_FPKM | WBls:0000032 | 47.0919 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 55.6245 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |