WormBase Tree Display for CDS: PPA46522

PPA46522 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons: 3 111
      240 314
      644 726
      1098 1157
      1449 1538
      2069 2206
      2775 2865
      3584 3707
      4115 4256
  DB_info: DB_remark: PPA-RNH-2 protein; contains similarity to Pfam domain PF01351 (Ribonuclease HII); contains similarity to Interpro domains IPR001352 (Ribonuclease HII/HIII), IPR023160 (Ribonuclease HII, helix-loop-helix cap domain superfamily), IPR004649 (Ribonuclease H2, subunit A), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR024567 (Ribonuclease HII/HIII domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Start_not_found: 1
  Visible: Gene: WBGene00304301
    Corresponding_transcript: PPA46522.1
    Corresponding_protein: PP74892
    Corresponding_oligo_set: GPL14372_Probes_82600
      GPL14372_Probes_82601
      GPL14372_Probes_82602
      GPL14372_Probes_82603
    Microarray_results: GPL14372_Probes_82600
      GPL14372_Probes_82601
      GPL14372_Probes_82602
      GPL14372_Probes_82603
    RNASeq_FPKM: WBls:0000032 4.55264 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.37763 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [190221 mh6] imported from pristionchus.org Curator_confirmed: WBPerson18244
  Method: curated