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WormBase Tree Display for CDS: PPA46624

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Name Class

PPA46624SMapS_parentSequencePPA_ChrI
StructureSource_exons17195
307403
632829
DB_infoDB_remarkcontains similarity to Pfam domains PF00276 (Ribosomal protein L23), PF03939 (Ribosomal protein L23, N-terminal domain); contains similarity to Interpro domains IPR005633 (Large ribosomal subunit protein uL23, N-terminal), IPR013025 (Large ribosomal subunit protein uL23-like), IPR019985 (Large ribosomal subunit protein uL23), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR012678 (Ribosomal protein uL23/eL15/eS24 core domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00304403
Corresponding_transcriptPPA46624.1
Corresponding_proteinPP04054
Corresponding_oligo_setGPL14372_Probes_78716
Matching_cDNA (224)
Microarray_resultsGPL14372_Probes_78716
RNASeq_FPKMWBls:0000032218.346From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010146.9098From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated