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WormBase Tree Display for CDS: PPA46643

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Name Class

PPA46643SMapS_parentSequencePPA_ChrI
StructureSource_exons (22)
DB_infoDB_remarkcontains similarity to Pfam domain PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD); contains similarity to Interpro domains IPR029000 (Cyclophilin-like domain superfamily), IPR002130 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
Start_not_found1
VisibleGeneWBGene00304422
Corresponding_transcriptPPA46643.1
Corresponding_proteinPP74780
Corresponding_oligo_setGPL14372_Probes_38387
GPL14372_Probes_43505
GPL14372_Probes_68497
GPL14372_Probes_68498
GPL14372_Probes_68499
GPL14372_Probes_68500
GPL14372_Probes_68501
GPL14372_Probes_68502
Matching_cDNAAW097385Inferred_automaticallytranscript_builder.pl
AA192062Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_38387
GPL14372_Probes_43505
GPL14372_Probes_68497
GPL14372_Probes_68498
GPL14372_Probes_68499
GPL14372_Probes_68500
GPL14372_Probes_68501
GPL14372_Probes_68502
RNASeq_FPKMWBls:000003266.9228From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010125.6864From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated