WormBase Tree Display for CDS: PPA46652
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PPA46652 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 2 | 80 | |||
325 | 425 | |||||
683 | 809 | |||||
1179 | 1281 | |||||
1813 | 1882 | |||||
2258 | 2367 | |||||
3835 | 3943 | |||||
4658 | 4758 | |||||
4998 | 5136 | |||||
DB_info | DB_remark | contains similarity to Pfam domains PF01585 (G-patch domain), PF13821 (Domain of unknown function (DUF4187)); contains similarity to Interpro domains IPR025239 (Domain of unknown function DUF4187), IPR039249 (G patch domain-containing protein 11), IPR000467 (G-patch domain) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00304431 | ||||
Corresponding_transcript | PPA46652.1 | |||||
Corresponding_protein | PP74557 | |||||
RNASeq_FPKM | WBls:0000032 | 4.38572 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |