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WormBase Tree Display for CDS: PPA46720

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Name Class

PPA46720SMapS_parentSequencePPA_ChrI
StructureSource_exons8591
584684
905976
18811933
20332120
DB_infoDB_remarkcontains similarity to Pfam domain PF00957 (Synaptobrevin); contains similarity to Interpro domains IPR016444 (Synaptobrevin/Vesicle-associated membrane protein), IPR001388 (Synaptobrevin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00304499
Corresponding_transcriptPPA46720.1
Corresponding_proteinPP74944
Corresponding_oligo_setGPL14372_Probes_73645
Matching_cDNAFG105818Inferred_automaticallytranscript_builder.pl
AW115502Inferred_automaticallytranscript_builder.pl
CN656974Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_73645
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010123.5808From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated