WormBase Tree Display for CDS: PPA46734
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PPA46734 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 3 | 131 | |||
192 | 257 | |||||
398 | 450 | |||||
509 | 650 | |||||
695 | 801 | |||||
887 | 985 | |||||
1053 | 1181 | |||||
1855 | 1992 | |||||
2277 | 2429 | |||||
2517 | 2637 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00304513 | ||||
Corresponding_transcript | PPA46734.1 | |||||
Corresponding_protein | PP74464 | |||||
RNASeq_FPKM | WBls:0000032 | 20.7384 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 61.2367 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |