WormBase Tree Display for CDS: PPA46748
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PPA46748 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | DB_remark | PPA-ATG-9 protein; contains similarity to Pfam domain PF04109 (Autophagy protein ATG9); contains similarity to Interpro domain IPR007241 (Autophagy-related protein 9) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00304527 | ||||
Corresponding_transcript | PPA46748.1 | |||||
Corresponding_protein | PP74799 | |||||
Matching_cDNA | EB183139 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM | WBls:0000032 | 2.81406 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 4.98498 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |