WormBase Tree Display for CDS: PPA46770
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PPA46770 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 3 | 143 | |||
189 | 347 | |||||
415 | 520 | |||||
598 | 692 | |||||
777 | 906 | |||||
1012 | 1156 | |||||
1200 | 1347 | |||||
1391 | 1579 | |||||
1627 | 1781 | |||||
1826 | 1910 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF13679 (Methyltransferase domain); contains similarity to Interpro domains IPR025714 (Methyltransferase domain), IPR029063 (S-adenosyl-L-methionine-dependent methyltransferase superfamily) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00304549 | ||||
Corresponding_transcript | PPA46770.1 | |||||
Corresponding_protein | PP74677 | |||||
Corresponding_oligo_set | GPL14372_Probes_78722 | |||||
Microarray_results | GPL14372_Probes_78722 | |||||
RNASeq_FPKM | WBls:0000032 | 2.80743 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 49.737 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |