WormBase Tree Display for CDS: PPA46788
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PPA46788 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 81 | |||
466 | 558 | |||||
652 | 698 | |||||
971 | 1092 | |||||
3220 | 3296 | |||||
3397 | 3475 | |||||
3557 | 3642 | |||||
3789 | 3863 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF05477 (Surfeit locus protein 2 (SURF2)) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00304567 | ||||
Corresponding_transcript | PPA46788.1 | |||||
Corresponding_protein | PP74595 | |||||
Corresponding_oligo_set | GPL14372_Probes_68850 | |||||
GPL14372_Probes_68851 | ||||||
GPL14372_Probes_68853 | ||||||
Matching_cDNA | FG103180 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_68850 | |||||
GPL14372_Probes_68851 | ||||||
GPL14372_Probes_68853 | ||||||
RNASeq_FPKM | WBls:0000032 | 42.7844 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.22037 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |