WormBase Tree Display for CDS: PPA46830
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PPA46830 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (24) | |||||
DB_info | DB_remark | PPA-NOA-1 protein; contains similarity to Pfam domain PF01926 (50S ribosome-binding GTPase); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR006073 (GTP binding domain) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00304609 | ||||
Corresponding_transcript | PPA46830.1 | |||||
Corresponding_protein | PP74542 | |||||
Corresponding_oligo_set | GPL14372_Probes_68216 | |||||
GPL14372_Probes_68218 | ||||||
GPL14372_Probes_68219 | ||||||
Microarray_results | GPL14372_Probes_68216 | |||||
GPL14372_Probes_68218 | ||||||
GPL14372_Probes_68219 | ||||||
RNASeq_FPKM | WBls:0000032 | 30.4908 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 17.147 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |