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WormBase Tree Display for CDS: PPA46839

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Name Class

PPA46839SMapS_parentSequencePPA_ChrI
StructureSource_exons625756
9321048
11081188
13511491
16261754
19492041
23322492
27852866
DB_infoDB_remarkcontains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00304618
Corresponding_transcriptPPA46839.1
Corresponding_proteinPP74884
Matching_cDNABI500707Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000003213.211From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010141.6128From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated