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WormBase Tree Display for CDS: PPA46860

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Name Class

PPA46860SMapS_parentSequencePPA_ChrI
StructureSource_exons827871
10181098
13541460
17851879
20632139
DB_infoDB_remarkPPA-SYX-6 protein; contains similarity to Pfam domain PF05739 (SNARE domain); contains similarity to Interpro domain IPR000727 (Target SNARE coiled-coil homology domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00304639
Corresponding_transcriptPPA46860.1
Corresponding_proteinPP74746
Matching_cDNAFG096374Inferred_automaticallytranscript_builder.pl
FG100400Inferred_automaticallytranscript_builder.pl
AW096918Inferred_automaticallytranscript_builder.pl
AW114341Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000003286.6739From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.753From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated