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WormBase Tree Display for CDS: PPA46877

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Name Class

PPA46877EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (34)
DB_infoDB_remarkcontains similarity to Pfam domain PF00439 (Bromodomain); contains similarity to Interpro domains IPR001487 (Bromodomain), IPR036427 (Bromodomain-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00304656
Corresponding_transcriptPPA46877.1
Corresponding_proteinPP75358
Corresponding_oligo_set (12)
Matching_cDNAFE936927Inferred_automaticallytranscript_builder.pl
FE934638Inferred_automaticallytranscript_builder.pl
Microarray_results (12)
RNASeq_FPKMWBls:000003251.8238From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010142.0757From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed25 Sep 2019 14:28:56WBPerson4055
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
[190925 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated