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WormBase Tree Display for CDS: PPA46921

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Name Class

PPA46921SMapS_parentSequencePPA_ChrI
StructureSource_exons (40)
DB_infoDB_remarkcontains similarity to Pfam domain PF09133 (SANTA (SANT Associated)); contains similarity to Interpro domains IPR015216 (SANT associated), IPR039110 (KNL2-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
Start_not_found1
VisibleGeneWBGene00304700
Corresponding_transcriptPPA46921.1
Corresponding_proteinPP74509
Corresponding_oligo_setGPL14372_Probes_77057
GPL14372_Probes_77058
Matching_cDNAFE940958Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_77057
GPL14372_Probes_77058
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.13366From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[190221 mh6] imported from pristionchus.orgCurator_confirmedWBPerson18244
Methodcurated