WormBase Tree Display for CDS: PPA46939
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PPA46939 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | DB_remark | PPA-NPA-1 protein; contains similarity to Pfam domain PF16469 (Nematode polyprotein allergen ABA-1); contains similarity to Interpro domains IPR038289 (DVA-1 superfamily), IPR032487 (Polyprotein allergen, nematode) | ||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00304718 | ||||
Corresponding_transcript | PPA46939.1 | |||||
Corresponding_protein | PP74556 | |||||
Corresponding_oligo_set | GPL14372_Probes_88174 | |||||
Microarray_results | GPL14372_Probes_88174 | |||||
RNASeq_FPKM | WBls:0000032 | 5.4171 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [190221 mh6] imported from pristionchus.org | Curator_confirmed | WBPerson18244 | |||
Method | curated |