WormBase Tree Display for CDS: PPA46987
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PPA46987 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 1 | 282 | |||
645 | 906 | |||||
1384 | 1454 | |||||
1873 | 1957 | |||||
2030 | 2166 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF11976 (Ubiquitin-2 like Rad60 SUMO-like); contains similarity to Interpro domains IPR029071 (Ubiquitin-like domain superfamily), IPR022617 (Rad60/SUMO-like domain) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00304841 | ||||
Corresponding_transcript | PPA46987.1 | |||||
Corresponding_protein | PP75111 | |||||
Corresponding_oligo_set | GPL14372_Probes_9305 | |||||
GPL14372_Probes_9306 | ||||||
GPL14372_Probes_9307 | ||||||
GPL14372_Probes_9308 | ||||||
Microarray_results | GPL14372_Probes_9305 | |||||
GPL14372_Probes_9306 | ||||||
GPL14372_Probes_9307 | ||||||
GPL14372_Probes_9308 | ||||||
RNASeq_FPKM | WBls:0000032 | 5.09084 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 04 Jul 2019 12:44:03 | WBPerson4055 | ||||
Remark | [190704 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |