WormBase Tree Display for CDS: PPA47023
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PPA47023 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrIII | |||
Structure | Source_exons (12) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR002291 (Phosphorylase kinase, gamma catalytic subunit), IPR000719 (Protein kinase domain) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00304876 | ||||
Corresponding_transcript | PPA47023.1 | |||||
Corresponding_protein | PP75041 | |||||
Corresponding_oligo_set | GPL14372_Probes_42583 | |||||
GPL14372_Probes_42587 | ||||||
Matching_cDNA | FE931779 | Inferred_automatically | transcript_builder.pl | |||
FE932055 | Inferred_automatically | transcript_builder.pl | ||||
FG104057 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_42583 | |||||
GPL14372_Probes_42587 | ||||||
RNASeq_FPKM | WBls:0000032 | 89.4571 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 54.4284 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 19 Jul 2019 10:40:32 | WBPerson4055 | ||||
Remark | [190719 mh6] This Gene has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |