WormBase Tree Display for CDS: PPA47118
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PPA47118 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons | 1 | 51 | |||
122 | 157 | |||||
216 | 299 | |||||
424 | 552 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00412 (LIM domain); contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00304976 | ||||
Corresponding_transcript | PPA47118.1 | |||||
Corresponding_protein | PP02785 | |||||
Corresponding_oligo_set | GPL14372_Probes_67668 | |||||
GPL14372_Probes_67670 | ||||||
Matching_cDNA | FG096963 | Inferred_automatically | transcript_builder.pl | |||
FG100251 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_67668 | |||||
GPL14372_Probes_67670 | ||||||
RNASeq_FPKM | WBls:0000032 | 65.0057 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 76.828 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 17 Sep 2019 11:31:57 | WBPerson4055 | ||||
Remark | [190917 mh6] This Gene has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |