WormBase Tree Display for CDS: PPA47120
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PPA47120 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (33) | |||||
DB_info | DB_remark | PPA-VAB-19 protein; contains similarity to Pfam domains PF12796 (Ankyrin repeats (3 copies)), PF13637 (Ankyrin repeats (many copies)); contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR020683 (Domain of unknown function DUF3447), IPR036770 (Ankyrin repeat-containing domain superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00304978 | ||||
Corresponding_transcript | PPA47120.1 | |||||
Corresponding_protein | PP75312 | |||||
Corresponding_oligo_set | GPL14372_Probes_67684 | |||||
GPL14372_Probes_67685 | ||||||
GPL14372_Probes_67686 | ||||||
GPL14372_Probes_67687 | ||||||
GPL14372_Probes_67688 | ||||||
Microarray_results | GPL14372_Probes_67684 | |||||
GPL14372_Probes_67685 | ||||||
GPL14372_Probes_67686 | ||||||
GPL14372_Probes_67687 | ||||||
GPL14372_Probes_67688 | ||||||
RNASeq_FPKM | WBls:0000032 | 1.11392 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 17 Sep 2019 11:41:07 | WBPerson4055 | ||||
Remark | [190917 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |