WormBase Tree Display for CDS: PPA47134
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| PPA47134 | Evidence | Curator_confirmed | WBPerson4055 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | PPA_ChrI | |||
| Structure | Source_exons | 1 | 78 | |||
| 693 | 861 | |||||
| 1446 | 1562 | |||||
| 1678 | 1762 | |||||
| 1853 | 1919 | |||||
| 2057 | 2193 | |||||
| 2420 | 2504 | |||||
| 2635 | 2772 | |||||
| 2849 | 3013 | |||||
| DB_info | DB_remark | contains similarity to Pfam domain PF01467 (Cytidylyltransferase-like); contains similarity to Interpro domains IPR004821 (Cytidyltransferase-like domain), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold) | ||||
| Origin | From_laboratory | HX | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00304995 | ||||
| Corresponding_transcript | PPA47134.1 | |||||
| Corresponding_protein | PP75235 | |||||
| Corresponding_oligo_set | GPL14372_Probes_78514 | |||||
| Matching_cDNA | FE938552 | Inferred_automatically | transcript_builder.pl | |||
| AW052286 | Inferred_automatically | transcript_builder.pl | ||||
| FG098831 | Inferred_automatically | transcript_builder.pl | ||||
| FE936061 | Inferred_automatically | transcript_builder.pl | ||||
| FE937222 | Inferred_automatically | transcript_builder.pl | ||||
| Microarray_results | GPL14372_Probes_78514 | |||||
| RNASeq_FPKM | WBls:0000032 | 19.6423 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 78.2949 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Last_reviewed | 17 Sep 2019 16:13:00 | WBPerson4055 | ||||
| Remark | [190917 mh6] This Gene has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
| From_analysis | RNASeq | |||||
| Method | curated |
