WormBase Tree Display for CDS: PPA47163
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PPA47163 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (13) | |||||
DB_info | DB_remark | contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00305026 | ||||
Corresponding_transcript | PPA47163.1 | |||||
Corresponding_protein | PP75403 | |||||
Corresponding_oligo_set | GPL14372_Probes_74284 | |||||
GPL14372_Probes_74285 | ||||||
Microarray_results | GPL14372_Probes_74284 | |||||
GPL14372_Probes_74285 | ||||||
RNASeq_FPKM | WBls:0000032 | 24.5895 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 24 Sep 2019 14:18:31 | WBPerson4055 | ||||
Remark | [190924 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |