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WormBase Tree Display for CDS: PPA47188

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Name Class

PPA47188EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (12)
DB_infoDB_remarkcontains similarity to Pfam domain PF01400 (Astacin (Peptidase family M12A)); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR017050 (Metallopeptidase, nematode), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00305057
Corresponding_transcriptPPA47188.1
Corresponding_proteinPP09282
Corresponding_oligo_setGPL14372_Probes_84221
GPL14372_Probes_84222
GPL14372_Probes_84223
GPL14372_Probes_84224
Microarray_resultsGPL14372_Probes_84221
GPL14372_Probes_84222
GPL14372_Probes_84223
GPL14372_Probes_84224
RNASeq_FPKMWBls:00000328.08497From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Oct 2019 15:59:55WBPerson4055
Remark[191008 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated