WormBase Tree Display for CDS: PPA47188
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PPA47188 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (12) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF01400 (Astacin (Peptidase family M12A)); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR017050 (Metallopeptidase, nematode), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00305057 | ||||
Corresponding_transcript | PPA47188.1 | |||||
Corresponding_protein | PP09282 | |||||
Corresponding_oligo_set | GPL14372_Probes_84221 | |||||
GPL14372_Probes_84222 | ||||||
GPL14372_Probes_84223 | ||||||
GPL14372_Probes_84224 | ||||||
Microarray_results | GPL14372_Probes_84221 | |||||
GPL14372_Probes_84222 | ||||||
GPL14372_Probes_84223 | ||||||
GPL14372_Probes_84224 | ||||||
RNASeq_FPKM | WBls:0000032 | 8.08497 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Oct 2019 15:59:55 | WBPerson4055 | ||||
Remark | [191008 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |