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WormBase Tree Display for CDS: PPA47190

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Name Class

PPA47190EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons187
12271359
21642301
23502468
25422612
26582801
28462951
30103068
34003421
DB_infoDB_remarkcontains similarity to Pfam domain PF00230 (Major intrinsic protein); contains similarity to Interpro domains IPR023271 (Aquaporin-like), IPR000425 (Major intrinsic protein)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00305059
Corresponding_transcriptPPA47190.1
Corresponding_proteinPP75636
Corresponding_oligo_setGPL14372_Probes_84212
GPL14372_Probes_84213
GPL14372_Probes_84214
GPL14372_Probes_84215
Matching_cDNAFG101628Inferred_automaticallytranscript_builder.pl
FG100838Inferred_automaticallytranscript_builder.pl
FG098307Inferred_automaticallytranscript_builder.pl
FG101829Inferred_automaticallytranscript_builder.pl
FE940881Inferred_automaticallytranscript_builder.pl
FE939857Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_84212
GPL14372_Probes_84213
GPL14372_Probes_84214
GPL14372_Probes_84215
RNASeq_FPKMWBls:000003230.975From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010148.7805From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Oct 2019 15:59:55WBPerson4055
Remark[191008 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated