WormBase Tree Display for CDS: PPA47233
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PPA47233 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 1 | 101 | |||
151 | 234 | |||||
321 | 390 | |||||
435 | 506 | |||||
553 | 641 | |||||
689 | 743 | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00042 (Globin); contains similarity to Interpro domains IPR000971 (Globin), IPR012085 (Globin, nematode), IPR012292 (Globin/Protoglobin), IPR009050 (Globin-like superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00305121 | ||||
Corresponding_transcript | PPA47233.1 | |||||
Corresponding_protein | PP75741 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 23 Oct 2019 16:36:45 | WBPerson4055 | ||||
Remark | [191023 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |