WormBase Tree Display for CDS: PPA47246
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PPA47246 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (16) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00305137 | ||||
Corresponding_transcript | PPA47246.1 | |||||
Corresponding_protein | PP75716 | |||||
Corresponding_oligo_set | GPL14372_Probes_36285 | |||||
Matching_cDNA | FG099749 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_36285 | |||||
RNASeq_FPKM | WBls:0000032 | 3.11624 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 22.0835 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 10:30:13 | WBPerson4055 | ||||
Remark | [191108 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |