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WormBase Tree Display for CDS: PPA47246

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Name Class

PPA47246EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (16)
DB_infoDB_remarkcontains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00305137
Corresponding_transcriptPPA47246.1
Corresponding_proteinPP75716
Corresponding_oligo_setGPL14372_Probes_36285
Matching_cDNAFG099749Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_36285
RNASeq_FPKMWBls:00000323.11624From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010122.0835From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Nov 2019 10:30:13WBPerson4055
Remark[191108 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated