WormBase Tree Display for CDS: PPA47248
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PPA47248 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (15) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00012 (Hsp70 protein); contains similarity to Interpro domains IPR029048 (Heat shock protein 70kD, C-terminal domain superfamily), IPR029047 (Heat shock protein 70kD, peptide-binding domain superfamily), IPR013126 (Heat shock protein 70 family), IPR043129 (ATPase, nucleotide binding domain) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00305139 | ||||
Corresponding_transcript | PPA47248.1 | |||||
PPA47248.2 | ||||||
Corresponding_protein | PP01398 | |||||
Corresponding_oligo_set | GPL14372_Probes_54745 | |||||
GPL14372_Probes_54746 | ||||||
Matching_cDNA | EB184474 | Inferred_automatically | transcript_builder.pl | |||
BI773613 | Inferred_automatically | transcript_builder.pl | ||||
BQ087813 | Inferred_automatically | transcript_builder.pl | ||||
AA193969 | Inferred_automatically | transcript_builder.pl | ||||
BI773628 | Inferred_automatically | transcript_builder.pl | ||||
BI773575 | Inferred_automatically | transcript_builder.pl | ||||
FE934282 | Inferred_automatically | transcript_builder.pl | ||||
AA193962 | Inferred_automatically | transcript_builder.pl | ||||
AI987027 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_54745 | |||||
GPL14372_Probes_54746 | ||||||
RNASeq_FPKM | WBls:0000032 | 7.68829 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 27.2391 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 10:51:21 | WBPerson4055 | ||||
Remark | [191108 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |