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WormBase Tree Display for CDS: PPA47248

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Name Class

PPA47248EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (15)
DB_infoDB_remarkcontains similarity to Pfam domain PF00012 (Hsp70 protein); contains similarity to Interpro domains IPR029048 (Heat shock protein 70kD, C-terminal domain superfamily), IPR029047 (Heat shock protein 70kD, peptide-binding domain superfamily), IPR013126 (Heat shock protein 70 family), IPR043129 (ATPase, nucleotide binding domain)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00305139
Corresponding_transcriptPPA47248.1
PPA47248.2
Corresponding_proteinPP01398
Corresponding_oligo_setGPL14372_Probes_54745
GPL14372_Probes_54746
Matching_cDNAEB184474Inferred_automaticallytranscript_builder.pl
BI773613Inferred_automaticallytranscript_builder.pl
BQ087813Inferred_automaticallytranscript_builder.pl
AA193969Inferred_automaticallytranscript_builder.pl
BI773628Inferred_automaticallytranscript_builder.pl
BI773575Inferred_automaticallytranscript_builder.pl
FE934282Inferred_automaticallytranscript_builder.pl
AA193962Inferred_automaticallytranscript_builder.pl
AI987027Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_54745
GPL14372_Probes_54746
RNASeq_FPKMWBls:00000327.68829From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010127.2391From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Nov 2019 10:51:21WBPerson4055
Remark[191108 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated