WormBase Tree Display for CDS: PPA47256
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PPA47256 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (13) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF00328 (Histidine phosphatase superfamily (branch 2)); contains similarity to Interpro domains IPR000560 (Histidine phosphatase superfamily, clade-2), IPR029033 (Histidine phosphatase superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00305147 | ||||
Corresponding_transcript | PPA47256.1 | |||||
Corresponding_protein | PP75700 | |||||
Corresponding_oligo_set | GPL14372_Probes_17710 | |||||
GPL14372_Probes_17711 | ||||||
GPL14372_Probes_17712 | ||||||
GPL14372_Probes_17713 | ||||||
GPL14372_Probes_17714 | ||||||
Matching_cDNA | FE935895 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_17710 | |||||
GPL14372_Probes_17711 | ||||||
GPL14372_Probes_17712 | ||||||
GPL14372_Probes_17713 | ||||||
GPL14372_Probes_17714 | ||||||
RNASeq_FPKM | WBls:0000032 | 9.18911 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 43.4129 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 14:48:40 | WBPerson4055 | ||||
Remark | [191108 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |