WormBase Tree Display for CDS: PPA47269
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PPA47269 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (16) | |||||
DB_info | DB_remark | PPA-MAB-20 protein; contains similarity to Pfam domain PF01403 (Sema domain); contains similarity to Interpro domains IPR027231 (Semaphorin), IPR001627 (Sema domain), IPR036352 (Sema domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00305163 | ||||
Corresponding_transcript | PPA47269.1 | |||||
Corresponding_protein | PP75511 | |||||
Corresponding_oligo_set | GPL14372_Probes_59073 | |||||
Matching_cDNA | FE933956 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_59073 | |||||
RNASeq_FPKM | WBls:0000032 | 35.1605 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 34.6041 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 14 Nov 2019 13:51:33 | WBPerson4055 | ||||
Remark | [191114 mh6] This Gene has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |