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WormBase Tree Display for CDS: PPA47273

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Name Class

PPA47273EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (14)
DB_infoDB_remarkcontains similarity to Pfam domains PF00038 (Intermediate filament protein), PF00932 (Lamin Tail Domain); contains similarity to Interpro domains IPR039008 (Intermediate filament, rod domain), IPR016451 (Intermediate filament, ifa/ifb), IPR042180 (), IPR001322 (Lamin tail domain), IPR036415 (Lamin tail domain superfamily)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00305167
Corresponding_transcriptPPA47273.1
Corresponding_proteinPP75481
Corresponding_oligo_setGPL14372_Probes_15898
GPL14372_Probes_15899
GPL14372_Probes_15900
GPL14372_Probes_15901
GPL14372_Probes_15902
Matching_cDNAFG095593Inferred_automaticallytranscript_builder.pl
FE940589Inferred_automaticallytranscript_builder.pl
FG097471Inferred_automaticallytranscript_builder.pl
FG095802Inferred_automaticallytranscript_builder.pl
FE935387Inferred_automaticallytranscript_builder.pl
FE935259Inferred_automaticallytranscript_builder.pl
DV018727Inferred_automaticallytranscript_builder.pl
FE935423Inferred_automaticallytranscript_builder.pl
FG101281Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_15898
GPL14372_Probes_15899
GPL14372_Probes_15900
GPL14372_Probes_15901
GPL14372_Probes_15902
RNASeq_FPKMWBls:00000329.89245From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010125.7029From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed14 Nov 2019 16:03:01WBPerson4055
Remark[191114 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated