WormBase Tree Display for CDS: PPA47275
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PPA47275 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (11) | |||||
DB_info | DB_remark | contains similarity to Pfam domain PF02485 (Core-2/I-Branching enzyme); contains similarity to Interpro domain IPR003406 (Glycosyl transferase, family 14) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00305169 | ||||
Corresponding_transcript | PPA47275.1 | |||||
Corresponding_protein | PP75601 | |||||
Corresponding_oligo_set | GPL14372_Probes_64588 | |||||
GPL14372_Probes_64589 | ||||||
GPL14372_Probes_64590 | ||||||
Matching_cDNA | FG094707 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_64588 | |||||
GPL14372_Probes_64589 | ||||||
GPL14372_Probes_64590 | ||||||
RNASeq_FPKM | WBls:0000032 | 42.6792 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 27.4969 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 14 Nov 2019 16:07:51 | WBPerson4055 | ||||
Remark | [191114 mh6] This gene has been split based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |