WormBase Tree Display for CDS: R05F9.10
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R05F9.10 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R05F9 | |||
Structure | Source_exons | 1 | 157 | |||
211 | 899 | |||||
1031 | 1198 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q21746 | ||
UniProt | UniProtAcc | Q21746 | ||||
UniProt_GCRP | UniProtAcc | Q21746 | ||||
AlphaFold | entry | Q21746 | ||||
NCBI_protein | GI_number | GI:351061495 | ||||
TREEFAM | TREEFAM_ID | TF313092 | ||||
Protein_id | CHROMOSOME_II | CCD69277 | 1 | |||
DB_remark | SGT-1 protein; contains similarity to Pfam domains PF00515 (Tetratricopeptide repeat), PF16546 (Homodimerisation domain of SGTA); contains similarity to Interpro domains IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR032374 (SGTA, homodimerisation domain), IPR001440 (Tetratricopeptide repeat 1), IPR047150 (SGT) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00019893 | ||||
Corresponding_transcript | R05F9.10.1 | |||||
Corresponding_protein | CE04813 | |||||
Corresponding_PCR_product | cenix:61-d12 | |||||
mv_R05F9.10 | ||||||
sjj2_R05F9.10 | ||||||
sjj_R05F9.10 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (311) | ||||||
RNAi_result (22) | ||||||
Microarray_results (15) | ||||||
Brief_identification | SGTA homodimerisation domain-containing protein | Accession_evidence | UniProt | TR:Q21746 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf004106 | |||||
Method | curated |