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WormBase Tree Display for CDS: R05F9.10

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Name Class

R05F9.10EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceR05F9
StructureSource_exons1157
211899
10311198
DB_infoDatabaseTrEMBLUniProtAccQ21746
UniProtUniProtAccQ21746
UniProt_GCRPUniProtAccQ21746
AlphaFoldentryQ21746
NCBI_proteinGI_numberGI:351061495
TREEFAMTREEFAM_IDTF313092
Protein_idCHROMOSOME_IICCD692771
DB_remarkSGT-1 protein; contains similarity to Pfam domains PF00515 (Tetratricopeptide repeat), PF16546 (Homodimerisation domain of SGTA); contains similarity to Interpro domains IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR032374 (SGTA, homodimerisation domain), IPR001440 (Tetratricopeptide repeat 1), IPR047150 (SGT)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00019893
Corresponding_transcriptR05F9.10.1
Corresponding_proteinCE04813
Corresponding_PCR_productcenix:61-d12
mv_R05F9.10
sjj2_R05F9.10
sjj_R05F9.10
Corresponding_oligo_set (14)
Matching_cDNA (311)
RNAi_result (22)
Microarray_results (15)
Brief_identificationSGTA homodimerisation domain-containing proteinAccession_evidenceUniProtTR:Q21746
RNASeq_FPKM (74)
Associated_featureWBsf004106
Methodcurated