WormBase Tree Display for CDS: T23G5.1
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T23G5.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T23G5 | |||
Structure | Source_exons | 1 | 126 | |||
171 | 449 | |||||
497 | 1227 | |||||
1450 | 2100 | |||||
2149 | 2728 | |||||
DB_info | Database | KEGG | KEGG_id | 1.17.4.1 | ||
SwissProt | UniProtAcc | Q03604 | ||||
UniProt | UniProtAcc | Q03604 | ||||
UniProt_GCRP | UniProtAcc | Q03604 | ||||
AlphaFold | entry | Q03604 | ||||
NCBI_protein | GI_number | GI:3880121 | ||||
TREEFAM | TREEFAM_ID | TF300578 | ||||
Protein_id | CHROMOSOME_III | CAA79574 | 1 | |||
DB_remark | RNR-1 protein; contains similarity to Pfam domains PF00317 (Ribonucleotide reductase, all-alpha domain), PF02867 (Ribonucleotide reductase, barrel domain), PF03477 (ATP cone domain); contains similarity to Interpro domains IPR013509 (Ribonucleotide reductase large subunit, N-terminal), IPR013346 (Ribonucleotide reductase, class I, alpha subunit, C-terminal), IPR039718 (Ribonucleoside-diphosphate reductase large subunit), IPR008926 (Ribonucleotide reductase R1 subunit, N-terminal), IPR005144 (ATP-cone domain), IPR000788 (Ribonucleotide reductase large subunit, C-terminal) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004391 | ||||
Corresponding_transcript | T23G5.1.1 | |||||
T23G5.1.2 | ||||||
Corresponding_protein | CE00331 | |||||
Corresponding_PCR_product | TH:321a6 | |||||
cenix:321-a6 | ||||||
mv_T23G5.1 | ||||||
sjj_T23G5.1 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (123) | ||||||
RNAi_result (25) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Ribonucleoside-diphosphate reductase large subunit | Accession_evidence | UniProt | SP:Q03604 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf002495 | |||||
Method | curated |