WormBase Tree Display for CDS: T24C4.2
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| T24C4.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T24C4 | |||
| Structure | Source_exons | 1 | 349 | |||
| 901 | 1412 | |||||
| 1939 | 2349 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9TZ37 | ||
| UniProt | UniProtAcc | Q9TZ37 | ||||
| UniProt_GCRP | UniProtAcc | Q9TZ37 | ||||
| AlphaFold | entry | Q9TZ37 | ||||
| NCBI_protein | GI_number | GI:351062073 | ||||
| TREEFAM | TREEFAM_ID | TF318082 | ||||
| Protein_id | CHROMOSOME_III | CCD69956 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF21599 (Zinc finger SWIM domain-containing protein 3, N-terminal); contains similarity to Interpro domains IPR040854 (Uncharacterized protein ZSWIM9), IPR048325 (ZSWIM3, N-terminal domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020758 | ||||
| Corresponding_transcript | T24C4.2.1 | |||||
| Corresponding_protein | CE19593 | |||||
| Corresponding_PCR_product | TH:328A9 | |||||
| cenix:328-a9 | ||||||
| mv_T24C4.2 | ||||||
| sjj_T24C4.2 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_16846 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_14564 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG2653|c4_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_142805 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_316443 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_18642 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF049H11_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00035916 | |||||
| WBRNAi00054038 | ||||||
| WBRNAi00006592 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | ZSWIM3 N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q9TZ37 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
