WormBase Tree Display for CDS: T25F10.4
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T25F10.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T25F10 | |||
Structure | Source_exons | 1 | 114 | |||
246 | 382 | |||||
434 | 650 | |||||
827 | 904 | |||||
952 | 1089 | |||||
1152 | 1233 | |||||
1282 | 1450 | |||||
1492 | 1567 | |||||
1782 | 1852 | |||||
1896 | 1992 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q23048 | ||
UniProt | UniProtAcc | Q23048 | ||||
UniProt_GCRP | UniProtAcc | Q23048 | ||||
AlphaFold | entry | Q23048 | ||||
NCBI_protein | GI_number | GI:351050918 | ||||
TREEFAM | TREEFAM_ID | TF319203 | ||||
Protein_id | CHROMOSOME_V | CCD74238 | 1 | |||
DB_remark | contains similarity to Interpro domain IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00020807 | ||||
Corresponding_transcript | T25F10.4.1 | |||||
Corresponding_protein | CE07535 | |||||
Corresponding_PCR_product | cenix:98-d9 | |||||
mv_T25F10.4 | ||||||
sjj_T25F10.4 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA | L1_Nanopore_Li_14662 | Inferred_automatically | transcript_builder.pl | |||
L1_Nanopore_Li_187370 | Inferred_automatically | transcript_builder.pl | ||||
FR829070 | Inferred_automatically | transcript_builder.pl | ||||
FM250530 | Inferred_automatically | transcript_builder.pl | ||||
EM_Nanopore_Li_73911 | Inferred_automatically | transcript_builder.pl | ||||
FR829028 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00019225 | |||||
WBRNAi00054146 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Neur_chan_LBD domain-containing protein | Accession_evidence | UniProt | TR:Q23048 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |