WormBase Tree Display for CDS: Y39A1A.6
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| Y39A1A.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y39A1A | |||
| Structure | Source_exons | 1 | 294 | |||
| 876 | 1052 | |||||
| 1269 | 1395 | |||||
| 2141 | 2325 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XX18 | ||
| UniProt | UniProtAcc | Q9XX18 | ||||
| UniProt_GCRP | UniProtAcc | Q9XX18 | ||||
| AlphaFold | entry | Q9XX18 | ||||
| NCBI_protein | GI_number | GI:3880849 | ||||
| TREEFAM | TREEFAM_ID | TF315111 | ||||
| Protein_id | CHROMOSOME_III | CAA21022 | 1 | |||
| DB_remark | MRPL-22 protein; contains similarity to Pfam domain PF00237 (Ribosomal protein L22p/L17e); contains similarity to Interpro domains IPR001063 (Large ribosomal subunit protein uL22), IPR036394 (Ribosomal protein uL22 superfamily), IPR047867 (Large ribosomal subunit protein uL22, bacterial/organelle-type) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00012645 | ||||
| Corresponding_transcript | Y39A1A.6.1 | |||||
| Corresponding_protein | CE19125 | |||||
| Corresponding_PCR_product | TH:325D8 | |||||
| cenix:325-d8 | ||||||
| mv_Y39A1A.6 | ||||||
| sjj2_Y39A1A.6 | ||||||
| sjj_Y39A1A.6 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (41) | ||||||
| RNAi_result | WBRNAi00056117 | |||||
| WBRNAi00006378 | ||||||
| WBRNAi00109883 | ||||||
| WBRNAi00072869 | ||||||
| WBRNAi00061652 | ||||||
| WBRNAi00036887 | ||||||
| WBRNAi00072871 | ||||||
| WBRNAi00072870 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Large ribosomal subunit protein uL22m | Accession_evidence | UniProt | TR:Q9XX18 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf009978 | |||||
| Method | curated |
