WormBase Tree Display for CDS: Y49F6B.4
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Y49F6B.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y49F6B | |||
Structure | Source_exons | 1 | 17 | |||
71 | 353 | |||||
435 | 671 | |||||
1975 | 2201 | |||||
4100 | 4441 | |||||
5829 | 6159 | |||||
7359 | 7565 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q9N4U5 | ||
UniProt | UniProtAcc | Q9N4U5 | ||||
UniProt_GCRP | UniProtAcc | Q9N4U5 | ||||
AlphaFold | entry | Q9N4U5 | ||||
NCBI_protein | GI_number | GI:351058097 | ||||
TREEFAM | TREEFAM_ID | TF321907 | ||||
Protein_id | CHROMOSOME_II | CCD64715 | 1 | |||
DB_remark | SMU-2 protein; contains similarity to Pfam domains PF07807 (RED-like protein C-terminal region), PF07808 (RED-like protein N-terminal region); contains similarity to Interpro domains IPR012492 (Protein RED, C-terminal), IPR039896 (Protein Red-like), IPR012916 (RED-like, N-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004896 | ||||
Corresponding_transcript | Y49F6B.4.1 | |||||
Corresponding_protein | CE25338 | |||||
Corresponding_PCR_product | cenix:54-e5 | |||||
mv_Y49F6B.4 | ||||||
sjj_Y49F6B.n | ||||||
Corresponding_oligo_set (23) | ||||||
Matching_cDNA (99) | ||||||
RNAi_result (13) | ||||||
Microarray_results (24) | ||||||
Brief_identification | Smu-2 suppressor of mec-8 and unc-52 protein | Accession_evidence | UniProt | SP:Q9N4U5 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |