WormBase Tree Display for CDS: Y54G2A.17c
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| Y54G2A.17c | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y54G2A | |||
| Structure | Source_exons | 1 | 717 | |||
| DB_info | Database | KEGG | KEGG_id | 6.3.4.21 | ||
| SwissProt | UniProtAcc | Q95XX1 | ||||
| UniProtIsoformAcc | Q95XX1-3 | |||||
| UniProt | UniProtAcc | Q95XX1 | ||||
| UniProt_GCRP | UniProtAcc | Q95XX1 | ||||
| AlphaFold | entry | Q95XX1 | ||||
| NCBI_protein | GI_number | GI:351051337 | ||||
| Protein_id | CHROMOSOME_IV | CCD83505 | 1 | |||
| DB_remark | NPRT-1 protein; contains similarity to Pfam domain PF17767 (Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain); contains similarity to Interpro domains IPR007229 (Nicotinate phosphoribosyltransferase family), IPR013785 (Aldolase-type TIM barrel), IPR036068 (Nicotinate phosphoribosyltransferase-like, C-terminal), IPR040727 (Nicotinate phosphoribosyltransferase, N-terminal domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AV193063 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00021882 | ||||
| Corresponding_transcript | Y54G2A.17c.1 | |||||
| Corresponding_protein | CE33887 | |||||
| Corresponding_PCR_product | cenix:144-a7 | |||||
| cenix:65-c11 | ||||||
| mv_Y54G2A.u | ||||||
| sjj2_Y54G2A.17a | ||||||
| Corresponding_oligo_set (13) | ||||||
| RNAi_result | WBRNAi00075046 | |||||
| WBRNAi00075042 | ||||||
| WBRNAi00075044 | ||||||
| WBRNAi00075045 | ||||||
| WBRNAi00075041 | ||||||
| WBRNAi00057446 | ||||||
| WBRNAi00072314 | ||||||
| WBRNAi00075043 | ||||||
| WBRNAi00037497 | ||||||
| WBRNAi00057447 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Nicotinate phosphoribosyltransferase | Accession_evidence | UniProt | SP:Q95XX1 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 11 Sep 2013 00:00:00 | WBPerson4025 | ||||
| Method | curated |
