WormBase Tree Display for CDS: Y71F9AL.18a
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| Y71F9AL.18a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y71F9AL | ||
| Structure | Source_exons | 1 | 93 | ||
| 159 | 878 | ||||
| 1528 | 1650 | ||||
| 2745 | 3322 | ||||
| 4976 | 5180 | ||||
| 10588 | 10920 | ||||
| 12472 | 12708 | ||||
| 14099 | 14314 | ||||
| 16460 | 16713 | ||||
| 16760 | 16838 | ||||
| DB_info | Database | KEGG | KEGG_id | 2.4.2.30 | |
| SwissProt | UniProtAcc | Q9N4H4 | |||
| UniProt | UniProtAcc | Q9N4H4 | |||
| UniProt_GCRP | UniProtAcc | Q9N4H4 | |||
| AlphaFold | entry | Q9N4H4 | |||
| NCBI_protein | GI_number | GI:351059483 | |||
| Protein_id | CHROMOSOME_I | CCD73512 | 1 | ||
| DB_remark | PARP-1 protein; contains similarity to Pfam domains PF00644 (Poly(ADP-ribose) polymerase catalytic domain), PF00645 (Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region), PF02877 (Poly(ADP-ribose) polymerase, regulatory domain), PF05406 (WGR domain), PF08063 (PADR1 domain, zinc ribbon fold), PF21728 (PADR1, N-terminal helical domain); contains similarity to Interpro domains IPR012982 (PARP1-like, PADR1 domain, zinc ribbon fold), IPR049296 (PARP1-like, PADR1 domain, N-terminal helical subdomain), IPR036930 (WGR domain superfamily), IPR008288 (Poly [ADP-ribose] polymerase), IPR036957 (Zinc finger, PARP-type superfamily), IPR008893 (WGR domain), IPR036616 (Poly(ADP-ribose) polymerase, regulatory domain superfamily), IPR038650 (PADR1, C-terminal domain superfamily), IPR004102 (Poly(ADP-ribose) polymerase, regulatory domain), IPR012317 (Poly(ADP-ribose) polymerase, catalytic domain), IPR001510 (Zinc finger, PARP-type) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | |||||
| Visible (11) | |||||
| Associated_feature | WBsf019686 | ||||
| Method | curated |
