WormBase Tree Display for CDS: Y94H6A.11a

Y94H6A.11a Evidence: Curator_confirmed: WBPerson4025
    Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: Y94H6A
  Structure: Source_exons: 1 51
      748 921
      2048 2245
      3757 4014
      5663 5758
      8408 8593
  DB_info: Database: TrEMBL UniProtAcc U4PLQ8
      UniProt UniProtAcc U4PLQ8
      UniProt_GCRP UniProtAcc U4PLQ8
      AlphaFold entry U4PLQ8
      NCBI_protein GI_number GI:548932403
    Protein_id: CHROMOSOME_IV CDH93023 1
    DB_remark: EGRH-3 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Curator_confirmed: WBPerson4025
      Feature_evidence: WBsf127984
  Visible: Gene: WBGene00044651
    Corresponding_transcript: Y94H6A.11a.1
    Corresponding_protein: CE48934
    Corresponding_oligo_set (15)
    Matching_cDNA: L1_Nanopore_Roach_29615
      adult_Nanopore_Roach_53714
      adult_Nanopore_Roach_50560
      elegans_PE_SS_GG3663|c12_g1_i2 Inferred_automatically: transcript_builder.pl
      elegans_PE_SS_GG3663|c12_g1_i1 Inferred_automatically: transcript_builder.pl
    Microarray_results (15)
    Brief_identification: C2H2-type domain-containing protein Accession_evidence: UniProt TR:U4PLQ8
    RNASeq_FPKM (74)
    Last_reviewed: 26 Sep 2013 00:00:00 WBPerson4025
    Remark: [20051020 po] made this model based on briggsae homology Curator_confirmed: WBPerson1867
      [130911 gw3] Autoconversion from AG1201_Y94H6A.11.T5. Added a new 5' exon based on the RNAseq data. Changed the frame of the 3' exon. Curator_confirmed: WBPerson4025
        From_analysis: RNASeq_Hillier_elegans
  Method: curated