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WormBase Tree Display for CDS: ZC373.7

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Name Class

ZC373.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZC373
StructureSource_exons1352
403944
DB_infoDatabaseTrEMBLUniProtAccQ23263
UniProtUniProtAccQ23263
UniProt_GCRPUniProtAccQ23263
AlphaFoldentryQ23263
NCBI_proteinGI_numberGI:3881378
TREEFAMTREEFAM_IDTF316783
Protein_idCHROMOSOME_XCAA889791
DB_remarkCOL-176 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000749
Corresponding_transcriptZC373.7.1
Corresponding_proteinCE02380
Corresponding_PCR_productcenix:241-e8
mv_ZC373.7
sjj_ZC373.7
smd_ZC373.7
Corresponding_oligo_set (15)
Matching_cDNA (28)
RNAi_resultWBRNAi00021657
WBRNAi00081666
WBRNAi00038023
WBRNAi00058851
Microarray_results (17)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q23263
RNASeq_FPKM (74)
Methodcurated